PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_141469g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 443aa    MW: 49452.1 Da    PI: 5.6671
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_141469g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-05247266120
                     CHHHHHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsaf 20 
                     +r++h ++Er+RR+++N+ +
  MA_141469g0010 247 QRMTHIAVERNRRKQMNEHL 266
                     79***************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-9239299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.27E-7245289No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MVLEALNSQV FNGTSMNQSP HEAGFAEMLH YPAERTTGMT FLQMLDGIAV NRDGVIRSFA  60
DDIEEKLAAP EQLEMKEQRP WQHGFQQLLN FPLCHQIDDS AFMLPPEFSN QHATQYVSKK  120
STGSVDNNNS HDFQQARIHH HQQLFEPESC ITHVSESCSP IKTEACKDHS SSDAIEEGVS  180
SAALDPNSCI TTNSSSENGT GGGFVTSSMM PSSTGPSSQL STRMEVRDRR KRKRSKACKN  240
SEEVESQRMT HIAVERNRRK QMNEHLSGDQ ASIIGGAIDF VKELEQLLQS LQAQKRKREC  300
EEFGCSPNSP TPFNGFFLSP QYTSYSAQWN SRYAVEKTSF NDTGNELIAE NKSAVADIEV  360
TMIETHASIK ILSQKRSGQL MKTIDKLQSL HMTILHLNIT TIDQTVLYSF NVKIEDECQL  420
TSADEIATAV HEIINSIHSN AIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228233RRKRKR
2247258RMTHIAVERNRR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF6766590.0EF676659.1 Picea sitchensis clone WS02746_J09 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006829211.14e-94PREDICTED: transcription factor bHLH94
TrEMBLB8LLL60.0B8LLL6_PICSI; Putative uncharacterized protein
STRINGVIT_07s0191g00240.t014e-67(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25315131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.12e-46bHLH family protein